Insertion junction: CLIP2.076217_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076217
Chromosome:chromosome 6
Location:2565585
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g269601 (1 of 3) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGCTCCTAGCTAGTAAGTTAGAGTTCTGCAGGGGGGCGGCGGGCGCT
Internal bar code:CTTAGCGATGCTTCTTTGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:915
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACTGTCAAACCGCACAC
Suggested primer 2:TCAGCTCGTCCACTTGTGTC