Insertion junction: CLIP2.076221_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076221
Chromosome:chromosome 1
Location:6812189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048850 (1 of 1) PF01342//PF01388 - SAND domain (SAND) // ARID/BRIGHT DNA binding domain (ARID) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGAACGCGAGTAGTAGTATAGCATGCATCTTAAGAGTTGCAAGAATG
Internal bar code:GATCGTCTGATCCGACGACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1990
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGCAGCTATCGGTCGTG
Suggested primer 2:CGCTGATTCATGCGCGTTAA