Insertion junction: CLIP2.076221_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076221
Chromosome:chromosome 1
Location:6812191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048850 (1 of 1) PF01342//PF01388 - SAND domain (SAND) // ARID/BRIGHT DNA binding domain (ARID) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTGGACGTAATCCATGTGGGCAGTGTTGACGTATCACCCTCCGTCAC
Internal bar code:AAGGTGGAAATAATGCCGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2249
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGATTCATGCGCGTTAA
Suggested primer 2:ATGAGCAGCTATCGGTCGTG