Insertion junction: CLIP2.076229_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076229
Chromosome:chromosome 16
Location:3555290
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g669193 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCCTTGGAGGTACAGCGCGTTGTCTCCAATCCAGCGCCCGGTGATGA
Internal bar code:GATTTGGTGCGGGGTCAAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GATTTCGGGTGGAGTGGTGT
Suggested primer 2:GACGGGTTGAGGAAGCTGAA