Insertion junction: CLIP2.076230_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076230
Chromosome:chromosome 9
Location:167796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386734 (1 of 2) PTHR31646//PTHR31646:SF1 - FAMILY NOT NAMED // ALPHA-1,2-MANNOSYLTRANSFERASE MNN2 3'UTR
Cre09.g386735 DLA1 Dihydrolipoamide acetyltransferase; (1 of 1) PTHR23151//PTHR23151:SF9 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCGCCTCTGCTTTAGAACCGCAGCCATTTTGTAACAGTACTTCGTTA
Internal bar code:TTTCAGGATTTGTGTGGACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3942
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGATCATTGGTGAAGTC
Suggested primer 2:GCTGAACCCCCATGTCGTAA