Insertion junction: CLIP2.076234_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076234
Chromosome:chromosome 1
Location:3023895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019100 HPR2 Hydroxypyruvate reductase 2; (1 of 1) PTHR10996//PTHR10996:SF20 - 2-HYDROXYACID DEHYDROGENASE-RELATED // D-3-PHOSPHOGLYCERATE DEHYDROGENASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATGCAGAGGAAGGGAGAGGGCCAGAGGGGGCAGAATGGCGCTGCGAAG
Internal bar code:AGACAATACATCGTTAAGACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3485
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAAGTCCCTGCTTACGG
Suggested primer 2:TAGGGCCTGGGTACTGGTAC