Insertion junction: CLIP2.076255_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076255
Chromosome:chromosome 16
Location:6513551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCGGTGAGCCGGGCCTGGGGTTCCTCCCCTCTCCGGAGGCGAGGAGC
Internal bar code:TGCCATTTTGATCCGCTCTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:791
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGTGTGCGTACAAGGAG
Suggested primer 2:TGGACATCACACGGAACCAG