Insertion junction: CLIP2.076258_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076258
Chromosome:chromosome 6
Location:7741031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302850 5'UTR
Cre06.g302900 (1 of 1) PTHR23180//PTHR23180:SF203 - CENTAURIN/ARF // CENTAURIN BETA 1A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATTTCACGCGCGTAGCTTTGCTCGACTGTTGCCACGGACTGTTGCTC
Internal bar code:GGATAGCTTTGTCATTGTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1294
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCACCTCAGCTTCAGGG
Suggested primer 2:ATGGTGCACAGCGTTGAAAC