Insertion junction: CLIP2.076260_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076260
Chromosome:chromosome 10
Location:4017571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g447500 KIN12-3,KIN16B,KIN16-2 Kinesin motor protein; (1 of 1) K10392 - kinesin family member 1 (KIF1) CDS
Cre10.g447550 (1 of 2) PF03200 - Glycosyl hydrolase family 63 C-terminal domain (Glyco_hydro_63) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTACTGAACTATTGCAACTAGACCGTTCGAATGGAGTCGTCTTGTCCA
Internal bar code:TGCTACCAATTGCGCTGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1722
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCCCTCCATCGTGTACG
Suggested primer 2:AGAACAGCAGTGCGATGTGA