Insertion junction: CLIP2.076266_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076266
Chromosome:chromosome 5
Location:1347384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234550 ALDCHL,FBA3 (1 of 1) PTHR11627//PTHR11627:SF8 - FRUCTOSE-BISPHOSPHATE ALDOLASE // FRUCTOSE-BISPHOSPHATE ALDOLASE 3, CHLOROPLASTIC-RELATED; Fructose-1%252C6-bisphosphate aldolase, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGCATGACCCACCCCTGTTGTTATCTCCCGACCGTACAGATTGCGT
Internal bar code:GACGACTTAGGTGTGTGCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2439
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGTTCAGACGAGCGGGT
Suggested primer 2:GTCCCCAGCAGGAGACTTTC