Insertion junction: CLIP2.076276_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076276
Chromosome:chromosome 16
Location:338476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694000 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 3'UTR
Cre16.g694208 (1 of 1) IPR001965//IPR011011//IPR019787//IPR028941 - Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Zinc finger, PHD-finger // WHIM2 domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGCACACAATTTTCTATGGGGGCCGCGTCCCCCCCGTCAATTTTGA
Internal bar code:CCGTTGTGCTTACTTGCCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2064
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCATCTGTGTTTCCCTCA
Suggested primer 2:CTGCATCTGCGTGTTAAGGC