Insertion junction: CLIP2.076276_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076276
Chromosome:chromosome 16
Location:338477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694000 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 3'UTR
Cre16.g694208 (1 of 1) IPR001965//IPR011011//IPR019787//IPR028941 - Zinc finger, PHD-type // Zinc finger, FYVE/PHD-type // Zinc finger, PHD-finger // WHIM2 domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGAAAAGCATGCAGGGCCAGGGGAGGGGGGAGGCGGACCAGGGGAGG
Internal bar code:GGTTGTGTCCTGCGTATGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5033
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATCTGCGTGTTAAGGC
Suggested primer 2:GCCCATCTGTGTTTCCCTCA