Insertion junction: CLIP2.076284_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076284
Chromosome:chromosome 12
Location:5350296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g528850 DLC3,ODA-LC3,DLX1 Flagellar Outer Arm Dynein Light Chain 3, thioredoxin; (1 of 7) 3.5.1.52 - Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase / N-oligosaccharide glycopeptidase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGGAGTTGGGCTTTGTTTGCCGAATGAAAGTTGCATGGGTGCCAAGC
Internal bar code:TCCTCTTGTATTGTCTTAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1259
LEAP-Seq percent confirming:72.5
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCCTTCTTCATCAGCCT
Suggested primer 2:CACTTCTCAGCGCACACCTA