Insertion junction: CLIP2.076286_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076286
Chromosome:chromosome 12
Location:3311510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498850 CEP12 Cysteine endopeptidase; (1 of 3) 3.4.18.1 - Cathepsin X / Lysosomal carboxypeptidase B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAACCTTGCGTTGGACATTTGGACATGCCCTCGCTCACCGGTGGATCA
Internal bar code:CATGTTGCGAGCGTCGATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5409
LEAP-Seq percent confirming:98.75
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCAATCACGCACACAGA
Suggested primer 2:GGTTTGGACGAGGTTTGTGC