Insertion junction: CLIP2.076289_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076289
Chromosome:chromosome 17
Location:3940545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727950 RPN2 26S proteasome regulatory subunit; (1 of 1) K03032 - 26S proteasome regulatory subunit N2 (PSMD1, RPN2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGACAGCAGGGCAGCAGCTGCAAGGGCAGGTTAGGTGCGGCAGCTC
Internal bar code:TTTATCGTTGATATTGAGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1030
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATTGGGGGTAGCAAGGT
Suggested primer 2:GCAGGTGAGTTGCTTGGTTG