Insertion junction: CLIP2.076290_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076290
Chromosome:chromosome 8
Location:4410754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385250 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCAACCTGGTAAGGTCAAGTTGTCTTATTCATAAGTTGCTACGTCATT
Internal bar code:GCCTGCACGGTTCGTTTCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1704
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGCCATGTTGACGAGTT
Suggested primer 2:TAGATGCCCTCCACAAAGCG