Insertion junction: CLIP2.076293_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076293
Chromosome:chromosome 3
Location:3464144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167050 PDX3 Pyridoxin biosynthesis protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACCTGCAGCTCCTGTCACCCGGCGACTTCTGGCTCTGCCCGTGCTGC
Internal bar code:TTTATTCAATCGTCTATGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4233
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATACACACACGGGCTT
Suggested primer 2:ACCCTACGTGCAACATGTGT