Insertion junction: CLIP2.076296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076296
Chromosome:chromosome 10
Location:3527315
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g444900 MFT4,MAE4 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCTTGACAGCCGTGCACGTTGTACCGCAGGGGAGGGCGCCAACACGG
Internal bar code:GGACAGGTTTGCTGGCGAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATTCGACACAAGCACCA
Suggested primer 2:TCGCTGTAGCCGTTTCATGT