Insertion junction: CLIP2.076300_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076300
Chromosome:chromosome 7
Location:5166286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348600 SULP1,SLP1 Chloroplast sulfate permease; (1 of 1) K02046 - sulfate transport system permease protein (cysU) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCGACGGTTGGCCTCGGCTTGCTTAGCTGCTTGCGTAACTGCTTGG
Internal bar code:GGGTGATGTTTGATGTGTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:35.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTGATCTTCCAGTGCCT
Suggested primer 2:ACGCATGTTGCCTGTATCCA