Insertion junction: CLIP2.076307_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076307
Chromosome:chromosome 12
Location:3533710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496500 PHC70 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGGTTGGAGGTGTGGAACTGTGCATGGCTTGGAGTAAGGTGGCAAG
Internal bar code:TACAGTTGGTTTTTGTAGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:9.67742
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGTTGTAAGCGAGCCAT
Suggested primer 2:ATTGCGGTTAGGACACCTGG