Insertion junction: CLIP2.076312_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076312
Chromosome:chromosome 16
Location:4766652
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g687850 PTK22 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype; Protein of unknown function intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACAAAGTGAGGCCGGTTGGGGTACGGTGCCATGAGCCCACCACGAAG
Internal bar code:CTTGGGTCCTACACATGATCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:478
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCGTCAATTGTACGGCA
Suggested primer 2:CGAGACATACGGAGTCGGTG