Insertion junction: CLIP2.076313_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076313
Chromosome:chromosome 2
Location:3041177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095600 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR
Cre02.g095650 (1 of 5) 1.14.13.114 - 6-hydroxynicotinate 3-monooxygenase / HNA-3-monooxygenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGATCGCAATTTCGGTGTTGCGTGTGTTCGCTACGAGCGTCTGGTTC
Internal bar code:ACGGGGGCAAAGACAATAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:84.375
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGGCTCTGGCACTTGAG
Suggested primer 2:TCATCTCCACAAGCACACCC