Insertion junction: CLIP2.076315_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076315
Chromosome:chromosome 6
Location:1156670
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258000 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAAGGGCCGGACCAGATTTCTTCGCAGATTGGCCCAACCACAGGTGC
Internal bar code:TTGCAATCGGAATTTCTTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:2.27273
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCCCTGGGAAAAGGTTT
Suggested primer 2:AAGAACGCACTTATGGCCCA