Insertion junction: CLIP2.076319_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076319
Chromosome:chromosome 13
Location:3877365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589600 (1 of 100) IPR001810 - F-box domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTGCGCGCGGGTATTCGCGCACGTGCAAGGCACGAACACGCAGAGTC
Internal bar code:ATTCCCGGGTGTTATTGGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1650
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCTGCACCACATCCTGA
Suggested primer 2:TGCGTCAGTGAAAGGAGTCC