Insertion junction: CLIP2.076320_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076320
Chromosome:chromosome 9
Location:4079402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399104 3'UTR
Cre09.g399141 PHT4B,PHT4-2 Sodium-dependent phosphate transporter, major facilitator superfamily; (1 of 1) PTHR11662:SF282 - ANION TRANSPORTER 5-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTTGCATGGTGGCTTGTCACAGCGCCTCAAAGTTGGGGGTTACCCAT
Internal bar code:TCCGCACAGCTGGGTATCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1516
LEAP-Seq percent confirming:62.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGCCCAACCCTTTCCAA
Suggested primer 2:CCGTTGTGATGCCCAACTTG