Insertion junction: CLIP2.076323_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076323
Chromosome:plastome
Location:23798
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802274 2717055,ChreCp012,rpl2 50S ribosomal protein L2; (1 of 2) IPR005880 - Ribosomal protein L2, bacterial/organellar-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCATTAACAGTAAGTTTACACCGTGCAAAAGGTCGTAATAATCGTGGT
Internal bar code:TGTAGACCAAGAACCAACCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:83
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGTGTAACTGGACGGCT
Suggested primer 2:AGGTGCCAATGCGTAGTTGA