Insertion junction: CLIP2.076329_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076329
Chromosome:chromosome 17
Location:4339972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGACCACCCAGAAACATATATATAACCACGGCTGAAAGTCCTCTTG
Internal bar code:CTTAATACGTTTAATCGGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2529
LEAP-Seq percent confirming:67.7083
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCCTTTTCAAGTTTGA
Suggested primer 2:GGTAACACAGCGACCCTCAA