Insertion junction: CLIP2.076330_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076330
Chromosome:chromosome 3
Location:4578102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176400 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGCTCCCCTGCTCGAGCCGCACCGCATCGCCTCCTTGTATCGGCCG
Internal bar code:ATGTTAGAAACGACCCCCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:827
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTGCTCTCCTTTCCCTG
Suggested primer 2:ATTATCCCGTGAATCCCGCC