Insertion junction: CLIP2.076337_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076337
Chromosome:chromosome 13
Location:439949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g564850 (1 of 1) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGATAACATAACATCGCGTGATAAGTTGGGCCGAAAAGTCTGTGCGCC
Internal bar code:CGATGGTGATAGACATACGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4429
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAGTTCCGATTTTAGCG
Suggested primer 2:CCGCTGTGGTCGGTAGATAC