Insertion junction: CLIP2.076338_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076338
Chromosome:chromosome 3
Location:4247191
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173950 (1 of 3) PF08495 - FIST N domain (FIST) 3'UTR
Cre03.g174000 EFG11,LPA2 Mitochondrial translation elongation factor EFG/EF2, LepA-related; (1 of 1) PTHR23115:SF97 - TRANSLATION FACTOR GUF1, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTGCAATCGCACGCTTGGTATGCGTCCCAGTCCCTCAACAATCTGCA
Internal bar code:TAGCCTCCGGCGCAACATAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2541
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATTGTGGGGTACTGTGG
Suggested primer 2:CTCCCATAACCCCCAAACCC