Insertion junction: CLIP2.076339_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076339
Chromosome:chromosome 9
Location:5653161
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410150 (1 of 140) IPR002048 - EF-hand domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTATGGGATTGGGGGTGTTTCGGCTACGCGTGCCCGATATGTAGTTT
Internal bar code:CTTAAGGGGAGGCATGTTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2216
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGATGCTGCTGCGATC
Suggested primer 2:TGTGCTTTGCCACCATTTCG