Insertion junction: CLIP2.076350_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076350
Chromosome:chromosome 11
Location:1775184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467900 (1 of 10) PF13578 - Methyltransferase domain (Methyltransf_24) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAGGACCCCACCGCCACGTTGTGTGAGCGTGCCGGAGTGCGCGTTCG
Internal bar code:GTGCGGCGCCTTAGCGATCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1506
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGCCAGCAATCCCAAAA
Suggested primer 2:CGGGTAGACGGTGTATGACG