Insertion junction: CLIP2.076358_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076358
Chromosome:chromosome 1
Location:280210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001678 (1 of 7) PTHR23257//PTHR23257:SF474 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTCGCAGTCAGTATGACGGGCGTATGAACCTGTGTCGTTAGGCGTCG
Internal bar code:ATGTTTGGCTGGTAGTCTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGACGATACAGGCTCACG
Suggested primer 2:TGTAGATAGCAGCGCCATGG