Insertion junction: CLIP2.076363_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076363
Chromosome:chromosome 2
Location:5143596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111700 EFH1 (1 of 3) PF13202//PF13499 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_7); EF-hand Calcium binding protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGTCATGAAGGCATGCGGTGACCGCAAGCCGGGTTTTCGACGAGCAG
Internal bar code:ATGGTGACCGGAGATGTTAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1756
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAATAGCCGCGCGAATTTCA
Suggested primer 2:GTGCGTGCTTGTGTGCTAAA