Insertion junction: CLIP2.076366_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076366
Chromosome:chromosome 7
Location:4878987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346400 FKM6 DNA methylase in the FkbM family; (1 of 3) K05302 - SET domain-containing protein 6 (SETD6) gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCCTGCTCGCGCAATCGGCCCTCGCGGCCTCGAGCTCTTCAGCTCCC
Internal bar code:ACGTAGCGTCGACGCGTTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:523
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACTGGACAAGGTGGTTA
Suggested primer 2:CATGCGAGCGACGAAAAGAG