Insertion junction: CLIP2.076381_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076381
Chromosome:chromosome 3
Location:2009620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155850 (1 of 1) IPR010912 - Spen paralogue/orthologue C-terminal, metazoa 3'UTR
Cre03.g155900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCCTCGACCACTGCCACAAGCCCGACACCAGAAGCAGTCCTATGTGT
Internal bar code:ACTTGGTACCTACCTTTGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:6235
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCACGTTCGAAAGGTCTA
Suggested primer 2:AGCTTGGATGGGAGCAAGAC