Insertion junction: CLIP2.076382_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076382
Chromosome:chromosome 4
Location:336242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217904 mL118,MRPL118,OPR133 mitochondrial ribosome protein mL118, Chlamydomonas-specific; (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR
Cre04.g217905 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGCTTTGAAATAACATTGGCAGAAGCGGCGAGGACCAGGCGGAGAAG
Internal bar code:AGTATTTCCACATGTCGCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCGCTTCAGTAAACACG
Suggested primer 2:CCGGCCAAGCAAATTTGTCA