Insertion junction: CLIP2.076382_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076382
Chromosome:chromosome 4
Location:336262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217904 mL118,MRPL118,OPR133 mitochondrial ribosome protein mL118, Chlamydomonas-specific; (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR
Cre04.g217905 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAGAAAGTCAGCAGACAGAGTTGTGGCACGTTTGTCCCGTAAGCTGC
Internal bar code:AATATAGCGTCGCCTTATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2465
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGCCAAGCAAATTTGTCA
Suggested primer 2:CGAGCGCTTCAGTAAACACG