Insertion junction: CLIP2.076390_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076390
Chromosome:chromosome 11
Location:4059782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480800 (1 of 1) K14773 - U3 small nucleolar RNA-associated protein 23 (UTP23) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAAGTAAGTTAAATGGAGCTGTTTGCAAAACCCTCATGCAGTTGCAC
Internal bar code:GCATTCAGTCAACCCTAAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:902
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGAGGGAGGGAGTTCTT
Suggested primer 2:GTGTGTGTGTCATGGTGTGC