Insertion junction: CLIP2.076394_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076394
Chromosome:chromosome 6
Location:5260695
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g284300 (1 of 7) IPR000048//IPR027417 - IQ motif, EF-hand binding site // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGAACAGTTGCTGGGTTCAGGAGTAGATCTGCAGTTGCCGCCAATA
Internal bar code:GCGGCCCATGGGTATAAGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:726
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCATTGCATTAGTCAGG
Suggested primer 2:CGGGCTTTCGTTTCGTTTGT