Insertion junction: CLIP2.076395_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076395
Chromosome:chromosome 12
Location:3333708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801391 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCTGAACTGGCAGCTTACGTGCCCAATTCAGCACTAAGCTAGACTCT
Internal bar code:TGTGGAGTCAAATGGCGCATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1527
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAAGCCCATCGGAAAGT
Suggested primer 2:TTGTGGAGATGCATGCGACT