Insertion junction: CLIP2.076399_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076399
Chromosome:chromosome 12
Location:8626887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548200 (1 of 1) PTHR21004:SF0 - PEROXISOMAL LEADER PEPTIDE-PROCESSING PROTEASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGTTGGAGACTGGCCGCTTGGAGGTGCGGTAGCGTGAGCTTCATGTGA
Internal bar code:TTTATACGGGAAATACACTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:629
LEAP-Seq percent confirming:2.5641
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGTGATACAGGCCCTCT
Suggested primer 2:ACCATTTCCTGCTGCTCCTC