Insertion junction: CLIP2.076405_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076405
Chromosome:chromosome 3
Location:3782611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169601 CSB18 {"Probable transposon-derived protein of Chlamydomonas-Specific family B; (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCGTGAGCGGTGTCAGCACAGCGTGACAGATGTCGTACACTTATGAG
Internal bar code:TCGTGGTACCCCCTATTCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4761
LEAP-Seq percent confirming:58.9744
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTCACCAAGGTTTGCCA
Suggested primer 2:TGAGAAGGCGGAGGATGAGA