Insertion junction: CLIP2.076413_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076413
Chromosome:chromosome 16
Location:1177931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650500 (1 of 1) K06195 - ApaG protein (apaG) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGCAATTGTCCATGGGTGCTACAAATTTGCGAGTTTGCGATGGAAC
Internal bar code:GTTCACGAACTGTTCCACAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCACCGCTTGATCACCT
Suggested primer 2:GTCAGGATCTGGTGTGTGGG