Insertion junction: CLIP2.076414_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.076414
Chromosome:chromosome 17
Location:172057
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g697050 (1 of 4) PF13911 - AhpC/TSA antioxidant enzyme (AhpC-TSA_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGTGCCAGCTCCCATGAAGTCAAGTCAGCAAAGTGGGTGAGGCACAC
Internal bar code:TTGAGAGGGTAGCAGGCATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:70
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTACAGTCGGCGTAGAC
Suggested primer 2:CCTACATCGACTACGCCCAC