Insertion junction: CLIP2.076418_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.076418
Chromosome:chromosome 10
Location:592517
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g801104 (1 of 1) IPR000104//IPR003072//IPR004333 - Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type // Transcription factor, SBP-box 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGAGAGTATAATAGTTTCAGGCGACTGAACTAAATTACTTTGACACA
Internal bar code:TATATAGGGTGTGTAAGCATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:100
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGCTCTAGTGCTCGAT
Suggested primer 2:GGACGGCATGGGAAGATAGG