Insertion junction: CLIP2.076434_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076434
Chromosome:chromosome 3
Location:3993292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171550 SSA13 cilia-sensing, structure and/or assembly; (1 of 1) PTHR21706//PTHR21706:SF15 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN 65 3'UTR
Cre03.g171600 XPP1,XPP Exopolyphosphatase; (1 of 2) K03787 - 5'-nucleotidase (surE) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATCGCGCGACTGGCTTTTAGCCCGTAAAGCCTTAAATCAAGCAAAAT
Internal bar code:AGTGCTAGAATATGCCATGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCCAGTGTCCTTTCGCA
Suggested primer 2:AAAGAGGTCGACCAGTGCTG