Insertion junction: CLIP2.076439_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076439
Chromosome:chromosome 6
Location:4836488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280227 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATATGTGGGTGGACCTGTTTGTGCGGGGGTGCGCAGTGGGGAGGGGT
Internal bar code:TAGTGAGCTACCAAGTGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1072
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTTCGTTCCTGGGTTCG
Suggested primer 2:ACGTTCAAGGTGCATCGCTA