Insertion junction: CLIP2.076443_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076443
Chromosome:chromosome 16
Location:4449607
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g668050 (1 of 97) PF13650 - Aspartyl protease (Asp_protease_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGATAACGCCCTCGAATACTCACTCGTGTTGCATGCGGCCTTCGCAAG
Internal bar code:TAGGGGGGCTTTACGCATCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:449
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCCCTTCCTCCCCAACC
Suggested primer 2:TCGACATTTGCTCGGTCACA