Insertion junction: CLIP2.076446_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076446
Chromosome:chromosome 4
Location:1949224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218750 THB4 Truncated hemoglobin; (1 of 1) IPR012292 - Globin/Protoglobin outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCATGAATCTAAATGCGCTTAGTCAAGCGTGCCCCCAACCCTTAGCAG
Internal bar code:TAGATCACAGTGTAAGGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2866
LEAP-Seq percent confirming:78.3784
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAAGATCGAGAAGGCGG
Suggested primer 2:TGCCGAACAACGTCTCATCA